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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920078.1_cds_XP_016469252.1_61809
CDS Infomation

[gene=LOC107791670] [db_xref=GeneID:107791670] [protein=preprotein translocase subunit SCY2, chloroplastic-like] [protein_id=XP_016469252.1] [location=join(27857..27920,29495..30016,30181..30269,31076..31155,31276..31365,32692..32783,33833..33916,34171..34312,35252..35368,35597..35726,36316..36439,36545..36651,37908..37997)] [gbkey=CDS]
Sequence

ATGGAAGCCGCTATTCTCAGCTCTTACACACCGCTTTCCTCAACGGCAGACCTCAGGATT
CGAGGAAAGTTTGCTGGATGTAATCTCCATTTCTATAATTTGCCATTGAACAGAACACGC
CTTCCTCTCAAGTTAAAATTTTCTGAATCGAGTAGAAGGCACTTTTTTTCACGAAAGGAT
CTGATATTGTCTAATGGTAGGAAAGAATTATCCAGCTATTTCACCCATCAACTTGCAAGT
CACTATACAAGTATCAGGGCATCATCGGGAGAAACGCTGCATTATGGACAATCTTCACCA
ATAAGTGAAGGTGAGGGAGTGTCACCAACATCTACAGATGCCAATAACTTTGTATCCTTG
CAGCTTAAGCAGAAGAAATTTAGAAACAGATTCTTGAACTTTGTAAGACTGGGATCTGTC
ATTGATAATGCTGCTGAGTCTTTTTTCAAGAGTGAGATACGGAGAAGGCTATTTGTGACT
GCCATTTTAATTGTCATCAGTCGTATAGGATATTTCATTCCTCTTCCAGGATTTGACAGG
AGGTTGATTCCAGAAGACTATCTCAGCTTTGTCTCAGGATCTGTTAATGAACTTGGCGAT
TCCACTCCTGAACTGAAACTCTCTCTTTTCCAACTTGGGGTCAGTCCTCAGATAGCGGCA
TCAATTCTTATGCAGGTACTATGTCATGTTCTTCCTTCTTTGGTGAAACTGAGAAAAGAG
GGCTTAGATGGGCATGAAAAGATCAAGAGTTATATATGGTGGATCTCGCTTGGTTTTGCA
ATTTTGGAGGCTCTTATTCTCTCTTGTTACTCACTTCCATATTCGATATATGCTGCCAGT
CATAGGGTTAAGCATGTGTTGATGACTTCCTTCCTTTTAGTTTCTGGTGCAATGACTATG
TCATGGATTTGTGACACAATAACAGAGTCTGGGTTTGGTCAAGGATCGACTTTGATTATT
TGTGTGGGTATTCTCACTGGCTACACAGATACATTGCAGAAAATGTTAACTCAAATAGCA
GGGAGTAGCGGGAGCTGGTGGCCTTATGTACTTGCTGTACTAGGTGTTTTTACTGTTGTT
ACAATGTGGGCCGTCGTTGTGAGTGAAGGGTGCCGGAAAGTAAAGCTGCAATATTACGGT
TTTAAAGTTGCTTCTGCTGCAAGAGAAGATTCTCCAGTTCCGGAGGTGGAGCCCTATATA
CCATTCAACATAAATCCAGCAGGAATGCAGCCTATCCTTGTTACCTCCTATCTGTTGGCA
CTTCCCAACATCCTTGCAAGTCTTCTTGGTTCAAGGTTTTGGGAACACTTCAGAGATATT
TTGAATCCTGACACTTCTCTTGGGGCAGATCCGTGGGTTTACTATACAGTTTATGCTTTC
TTTGTCTTCCTCTTCAACATATTTGACATTGCCAACATGCCAAAAGAAATTGCTGATTAC
TTAAACAAGATAGCTGCTAGAATTCCAGGTATAAAGCCTGGAAAAGCTACAATTGAATAT
CTGACAAAGATCCAAGCTTCAACACGGTTCTGGGGTGGTCTGTTATTAAGTGTTTTGGCC
ACGACATCCACCATTCTAGACCATAATTTGCGCCGCATCAATGAAGGATATGCAATAGGA
TTGACATCAGTGCTAATAATTGTGGGCTCAATCATTGAATTGAGAAGATCTTATCAAGCA
TATAATGTAATGCCAAGTCTAAGTATGGCTTTGAAGCGGTATGGTGTATGA

Peptide Sequence

PEP ID

XP_016469252.1
PEP Infomation

PREDICTED: preprotein translocase subunit SCY2, chloroplastic-like [Nicotiana tabacum]
Sequence

MEAAILSSYTPLSSTADLRIRGKFAGCNLHFYNLPLNRTRLPLKLKFSESSRRHFFSRKD
LILSNGRKELSSYFTHQLASHYTSIRASSGETLHYGQSSPISEGEGVSPTSTDANNFVSL
QLKQKKFRNRFLNFVRLGSVIDNAAESFFKSEIRRRLFVTAILIVISRIGYFIPLPGFDR
RLIPEDYLSFVSGSVNELGDSTPELKLSLFQLGVSPQIAASILMQVLCHVLPSLVKLRKE
GLDGHEKIKSYIWWISLGFAILEALILSCYSLPYSIYAASHRVKHVLMTSFLLVSGAMTM
SWICDTITESGFGQGSTLIICVGILTGYTDTLQKMLTQIAGSSGSWWPYVLAVLGVFTVV
TMWAVVVSEGCRKVKLQYYGFKVASAAREDSPVPEVEPYIPFNINPAGMQPILVTSYLLA
LPNILASLLGSRFWEHFRDILNPDTSLGADPWVYYTVYAFFVFLFNIFDIANMPKEIADY
LNKIAARIPGIKPGKATIEYLTKIQASTRFWGGLLLSVLATTSTILDHNLRRINEGYAIG
LTSVLIIVGSIIELRRSYQAYNVMPSLSMALKRYGV

Transcript Sequence

Gene sequence data has not been registered.